CommunityData:Hyak example job script: Difference between revisions
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(Example hyak job script) |
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#PBS -l nodes=1:ppn=16,mem=20gb,feature=16core | #PBS -l nodes=1:ppn=16,mem=20gb,feature=16core | ||
#PBS -l walltime=2:00:00 | #PBS -l walltime=2:00:00 | ||
#PBS -o /usr/lusers/ | #PBS -o /usr/lusers/USERNAME/batch_jobs/wikiq_test | ||
#PBS -d /usr/lusers/ | #PBS -d /usr/lusers/USERNAME/batch_jobs/wikiq-test | ||
##PBS -t 0-5 | ##PBS -t 0-5 | ||
HYAK_SLOTS=`wc -l < $PBS_NODEFILE` | HYAK_SLOTS=`wc -l < $PBS_NODEFILE` | ||
Revision as of 00:04, 26 July 2017
#!/bin/bash #PBS -N wikiq #PBS -W group_list=hyak-mako #PBS -l nodes=1:ppn=16,mem=20gb,feature=16core #PBS -l walltime=2:00:00 #PBS -o /usr/lusers/USERNAME/batch_jobs/wikiq_test #PBS -d /usr/lusers/USERNAME/batch_jobs/wikiq-test ##PBS -t 0-5 HYAK_SLOTS=`wc -l < $PBS_NODEFILE` #PYTHON_PATH="/com/local/lib/python3.4:$PYTHON_PATH" PATH="/com/local/bin:$PATH" source /etc/profile.d/modules.sh #module load revolutionr_7.2 module load parallel_sql umask 007 parallel_sql --sql -a parallel --exit-on-term -j $HYAK_SLOTS
